STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3Enoyl-CoA hydratase domain containing 3. (132 aa)    
Predicted Functional Partners:
ALPK2
Uncharacterized protein.
      
 0.557
SFXN5
Sideroflexin 5.
      
 0.544
FAM168A
Family with sequence similarity 168 member A.
      
 0.544
IVD
Isovaleryl-CoA dehydrogenase.
   
 
 0.510
KLHL2
Kelch like family member 2.
      
 0.503
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
      
 0.444
CASS4
Cas scaffold protein family member 4.
      
 0.429
USP6NL
USP6 N-terminal like.
      
 0.413
U3IPV0_ANAPP
Rab-GAP TBC domain-containing protein.
      
 0.413
U3J2Q4_ANAPP
Uncharacterized protein.
      
 0.409
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.