Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SRSF11Serine and arginine rich splicing factor 11. (469 aa)    
Predicted Functional Partners:
SRSF2
RRM domain-containing protein.
   
0.886
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.853
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.845
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.831
U3J272_ANAPP
RRM domain-containing protein.
   
 0.829
SRSF7
Uncharacterized protein.
   
 0.828
SRSF1
Uncharacterized protein.
   
 0.787
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.775
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.759
RBM39
RNA binding motif protein 39.
   
 
 0.751
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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