STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM135BFamily with sequence similarity 135 member B. (1420 aa)    
Predicted Functional Partners:
VPS35L
VPS35 endosomal protein sorting factor like.
   
  
 0.624
DEPDC7
DEP domain containing 7.
      
 0.611
FAM177A1
Family with sequence similarity 177 member A1.
      
 0.611
METTL23
Methyltransferase like 23.
      
 0.586
LRP12
LDL receptor related protein 12.
      
 0.586
GSKIP
GSK3B interacting protein.
      
 0.555
PRPF4B
Pre-mRNA processing factor 4B.
      
 0.551
ATAD2B
ATPase family AAA domain containing 2B.
      
 0.545
ADCK1
AarF domain containing kinase 1.
      
 0.539
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
      
 0.524
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.