Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM196Transmembrane protein 196. (179 aa)    
Predicted Functional Partners:
SP4
Sp4 transcription factor.
      
 0.671
MBIP
MAP3K12 binding inhibitory protein 1.
      
 0.612
PXYLP1
2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family.
      
 0.545
B4GALT6
Beta-1,4-galactosyltransferase 6.
      
 0.482
ITPK1
Inositol-tetrakisphosphate 1-kinase.
      
 0.482
B4GALT5
Beta-1,4-galactosyltransferase 5.
      
 0.482
DNAJC28
DnaJ heat shock protein family (Hsp40) member C28.
      
 0.458
CAPNS2
Calpain small subunit 2.
      
 0.433
SP3
Sp3 transcription factor.
      
 0.403
HACE1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.402
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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