Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP1A | NCBP1 | ENSAPLP00000014783 | ENSAPLP00000016232 | Decapping mRNA 1A. | Nuclear cap binding protein subunit 1. | 0.475 |
DCP1A | PABPC1 | ENSAPLP00000014783 | ENSAPLP00000000885 | Decapping mRNA 1A. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.736 |
DCP1A | RBM8A | ENSAPLP00000014783 | ENSAPLP00000001249 | Decapping mRNA 1A. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.589 |
DCP1A | SMG1 | ENSAPLP00000014783 | ENSAPLP00000011605 | Decapping mRNA 1A. | SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. | 0.522 |
DCP1A | SMG5 | ENSAPLP00000014783 | ENSAPLP00000010035 | Decapping mRNA 1A. | SMG5 nonsense mediated mRNA decay factor. | 0.798 |
DCP1A | SMG7 | ENSAPLP00000014783 | ENSAPLP00000015728 | Decapping mRNA 1A. | SMG7 nonsense mediated mRNA decay factor. | 0.721 |
DCP1A | U3J0G9_ANAPP | ENSAPLP00000014783 | ENSAPLP00000012996 | Decapping mRNA 1A. | Uncharacterized protein. | 0.761 |
DCP1A | UPF1 | ENSAPLP00000014783 | ENSAPLP00000008896 | Decapping mRNA 1A. | UPF1 RNA helicase and ATPase. | 0.866 |
DCP1A | UPF2 | ENSAPLP00000014783 | ENSAPLP00000029974 | Decapping mRNA 1A. | UPF2 regulator of nonsense mediated mRNA decay. | 0.582 |
DCP1A | UPF3A | ENSAPLP00000014783 | ENSAPLP00000025196 | Decapping mRNA 1A. | UPF3A regulator of nonsense mediated mRNA decay. | 0.596 |
NCBP1 | DCP1A | ENSAPLP00000016232 | ENSAPLP00000014783 | Nuclear cap binding protein subunit 1. | Decapping mRNA 1A. | 0.475 |
NCBP1 | PABPC1 | ENSAPLP00000016232 | ENSAPLP00000000885 | Nuclear cap binding protein subunit 1. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.776 |
NCBP1 | RBM8A | ENSAPLP00000016232 | ENSAPLP00000001249 | Nuclear cap binding protein subunit 1. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.738 |
NCBP1 | SMG1 | ENSAPLP00000016232 | ENSAPLP00000011605 | Nuclear cap binding protein subunit 1. | SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. | 0.546 |
NCBP1 | SMG5 | ENSAPLP00000016232 | ENSAPLP00000010035 | Nuclear cap binding protein subunit 1. | SMG5 nonsense mediated mRNA decay factor. | 0.807 |
NCBP1 | SMG7 | ENSAPLP00000016232 | ENSAPLP00000015728 | Nuclear cap binding protein subunit 1. | SMG7 nonsense mediated mRNA decay factor. | 0.807 |
NCBP1 | U3J0G9_ANAPP | ENSAPLP00000016232 | ENSAPLP00000012996 | Nuclear cap binding protein subunit 1. | Uncharacterized protein. | 0.815 |
NCBP1 | UPF1 | ENSAPLP00000016232 | ENSAPLP00000008896 | Nuclear cap binding protein subunit 1. | UPF1 RNA helicase and ATPase. | 0.854 |
NCBP1 | UPF2 | ENSAPLP00000016232 | ENSAPLP00000029974 | Nuclear cap binding protein subunit 1. | UPF2 regulator of nonsense mediated mRNA decay. | 0.712 |
NCBP1 | UPF3A | ENSAPLP00000016232 | ENSAPLP00000025196 | Nuclear cap binding protein subunit 1. | UPF3A regulator of nonsense mediated mRNA decay. | 0.836 |
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