Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCGF5Polycomb group ring finger 5. (270 aa)    
Predicted Functional Partners:
AUTS2
Activator of transcription and developmental regulator AUTS2.
    
 0.998
CBX8
Chromobox 8.
    
 0.949
RYBP
RING1 and YY1 binding protein.
    
 0.946
RNF2
Ring finger protein 2.
    
 0.940
ENSAPLP00000026465
RAWUL domain-containing protein.
    
 0.940
PCGF3
Polycomb group ring finger 3.
    
0.926
YAF2
YY1 associated factor 2.
    
 0.916
PCGF1
Polycomb group ring finger 1.
    
0.897
CBX6
Chromobox 6.
    
 0.887
CSNK2A2
Casein kinase 2 alpha 2.
    
 0.871
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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