Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC4Armadillo repeat containing 4. (404 aa)    
Predicted Functional Partners:
CCDC39
Coiled-coil domain containing 39.
   
 
 0.918
U3I908_ANAPP
Uncharacterized protein.
   
 
 0.916
TTC25
Uncharacterized protein.
  
 
 0.896
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.887
U3I2X0_ANAPP
Uncharacterized protein.
   
 
 0.883
ENSAPLP00000025240
Uncharacterized protein.
   
 
 0.875
RSPH4A
Radial spoke head 6 homolog A.
   
 
 0.866
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.863
CCDC65
Coiled-coil domain containing 65.
   
 
 0.858
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.855
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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