STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNQ5Potassium voltage-gated channel subfamily Q member 5; Belongs to the potassium channel family. (912 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.748
OGFRL1
Opioid growth factor receptor like 1.
      
 0.605
ASIC4
Acid sensing ion channel subunit family member 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.600
MGP
Matrix Gla protein.
      
 0.549
RIMS1
Regulating synaptic membrane exocytosis 1.
   
  
 0.526
COCH
Cochlin.
   
 
 0.526
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
   
 0.526
GLI2
Uncharacterized protein.
      
 0.519
PVALB
Parvalbumin; Belongs to the parvalbumin family.
    
 0.518
RPL21
Uncharacterized protein.
   
 0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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