STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4orf47Chromosome 4 open reading frame 47. (310 aa)    
Predicted Functional Partners:
C5orf49
Chromosome 5 open reading frame 49.
  
  
 0.612
ARMC3
Armadillo repeat containing 3.
   
  
 0.597
C9orf116
Chromosome 9 open reading frame 116.
      
 0.588
IQUB
IQ motif and ubiquitin domain containing.
      
 0.577
CFAP299
Cilia and flagella associated protein 299.
   
  
 0.543
U3HYG5_ANAPP
DUF4201 domain-containing protein.
    
 0.510
CCDC170
Coiled-coil domain containing 170.
    
 0.507
ENKD1
Enkurin domain containing 1.
      
 0.485
ARMC4
Armadillo repeat containing 4.
   
  
 0.448
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.