STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA1Cyclic nucleotide gated channel subunit alpha 1. (634 aa)    
Predicted Functional Partners:
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
  
0.998
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
     
 0.926
CALM1
Calmodulin 1; Belongs to the calmodulin family.
     
 0.926
CALML4
Calmodulin like 4.
     
 0.917
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.913
PDE6B
Phosphodiesterase.
   
 0.783
U3ICB9_ANAPP
Rhodopsin.
   
 
 0.736
SLC24A1
Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
 0.736
RHO
Rhodopsin.
   
 
 0.730
PDE6C
Phosphodiesterase.
   
 0.633
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.