STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA1Cyclic nucleotide gated channel subunit alpha 1. (634 aa)    
Predicted Functional Partners:
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
  
0.991
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.960
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
    
 0.948
CALM1
Calmodulin 1; Belongs to the calmodulin family.
    
 0.948
CALML4
Calmodulin like 4.
    
 0.925
NFXL1
Nuclear transcription factor, X-box binding like 1.
      
 0.859
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.856
GUCA1B
Guanylate cyclase activator 1B.
   
 0.826
PDE6B
Phosphodiesterase.
   
 0.798
GUCA1C
Guanylate cyclase activator 1C.
    
 0.713
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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