STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD5Methyl-CpG binding domain protein 5. (1735 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor C2.
    
 0.673
DNMT3B
DNA methyltransferase 3 beta.
    
 0.650
ASXL2
ASXL transcriptional regulator 2.
   
 0.626
ASXL1
ASXL transcriptional regulator 1.
   
 0.615
DNMT1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.602
KDM1B
Lysine demethylase 1B.
    
 0.583
ASXL3
Uncharacterized protein.
   
 0.517
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.493
FOXK2
Forkhead box K2.
    
 0.491
FOXK1
Forkhead box K1.
    
 0.491
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.