STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD5Methyl-CpG binding domain protein 5. (1735 aa)    
Predicted Functional Partners:
ASXL2
ASXL transcriptional regulator 2.
   
 0.924
ASXL1
ASXL transcriptional regulator 1.
   
 0.881
KDM1B
Lysine demethylase 1B.
   
 0.816
HCFC2
Host cell factor C2.
    
 0.713
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.643
ASXL3
Uncharacterized protein.
   
 0.638
DNMT1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.636
SMC2
Structural maintenance of chromosomes protein.
    
 0.634
FOXK2
Forkhead box K2.
    
 0.622
FOXK1
Forkhead box K1.
    
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.