STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RS1Retinoschisin 1. (212 aa)    
Predicted Functional Partners:
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
   
  
 0.626
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
   
  
 0.581
RPGR
Retinitis pigmentosa GTPase regulator.
     
 0.550
SLC40A1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.544
AASDH
Aminoadipate-semialdehyde dehydrogenase.
     
 0.467
PROS1
Protein S.
   
 0.460
ATP7B
ATPase copper transporting beta.
  
 
 0.456
ATP7A
ATPase copper transporting alpha.
  
 
 0.456
RP2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
   
  
 0.438
PEX10
Peroxisomal biogenesis factor 10.
    
 
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.