STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SP4Sp4 transcription factor. (780 aa)    
Predicted Functional Partners:
SP1
Sp1 transcription factor.
    
  0.733
TMEM196
Transmembrane protein 196.
      
 0.671
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.597
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.574
TBPL2
TATA-box binding protein like 2.
    
 0.503
TBP
TATA-box binding protein.
    
 0.503
ENSAPLP00000028196
Gp_dh_C domain-containing protein.
    
 
 0.492
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
      
 0.481
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
      
 0.448
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
     
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.