STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO7F-box protein 7. (588 aa)    
Predicted Functional Partners:
PSMF1
Proteasome inhibitor subunit 1.
   
 
 0.976
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.970
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 
 0.941
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.929
RBX1
Ring-box 1.
    
 0.919
PSMG2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.
    
 
 0.914
PSMB3
Proteasome subunit beta 3.
    
   0.905
PSMB2
Proteasome subunit beta.
    
   0.898
COPS4
COP9 signalosome subunit 4.
    
 0.852
PINK1
PTEN induced kinase 1.
    
 
 0.847
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.