STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS1Regulating synaptic membrane exocytosis 1. (1379 aa)    
Predicted Functional Partners:
UNC13B
Unc-13 homolog B.
   
 0.895
UNC13C
Unc-13 homolog C.
   
 0.895
TSPOAP1
Uncharacterized protein.
    
 0.865
RIMBP2
RIMS binding protein 2.
    
 0.865
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.714
ERC1
ELKS/RAB6-interacting/CAST family member 1.
   
 
 0.714
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.687
OGFRL1
Opioid growth factor receptor like 1.
      
 0.683
RAB3B
RAB3B, member RAS oncogene family.
    
 0.643
RAB3C
RAB3C, member RAS oncogene family.
    
 0.643
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.