STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF38Rho guanine nucleotide exchange factor 38. (882 aa)    
Predicted Functional Partners:
SH3YL1
SH3 and SYLF domain containing 1.
    
 
 0.751
AMPH
Amphiphysin.
    
 
 0.673
BIN2
Bridging integrator 2.
    
 
 0.673
BIN1
Bridging integrator 1.
    
 
 0.673
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.623
GLRA1
Glycine receptor alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.612
TPK1
Thiamin pyrophosphokinase 1.
      
 0.611
CDC42
Cell division cycle 42.
    
 0.565
RHOH
Ras homolog family member H.
    
 0.514
RHOG-2
Uncharacterized protein.
    
 0.514
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.