Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF38Rho guanine nucleotide exchange factor 38. (882 aa)    
Predicted Functional Partners:
BIN3
Bridging integrator 3.
    
 
 0.749
NGEF
Uncharacterized protein.
     
 0.655
AMPH
Amphiphysin.
    
 
 0.609
BIN2
Bridging integrator 2.
    
 
 0.609
BIN1
Bridging integrator 1.
    
 
 0.609
IFRD1
Interferon related developmental regulator 1.
      
 0.606
FARP2
Uncharacterized protein.
   
 
 0.605
SH3BP4
SH3 domain binding protein 4.
      
 0.602
ENSAPLP00000021373
Uncharacterized protein.
    
 
 0.587
PAXIP1
PAX interacting protein 1.
      
 0.564
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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