STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPGEFL1Rap guanine nucleotide exchange factor like 1. (491 aa)    
Predicted Functional Partners:
ENSAPLP00000032868
DEP domain-containing protein.
 
  
 
 0.934
OGFOD3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.689
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.669
DIRAS3
Uncharacterized protein.
    
 0.640
SERAC1
Serine active site containing 1.
      
 0.566
FAM118A
Family with sequence similarity 118 member A.
      
 0.566
PLCE1
Phosphoinositide phospholipase C.
   
  
 0.552
RRAD
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
    
 0.526
CCDC92
Coiled-coil domain containing 92.
      
 0.485
RNFT1
Ring finger protein, transmembrane 1.
      
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.