STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPGEFL1Rap guanine nucleotide exchange factor like 1. (491 aa)    
Predicted Functional Partners:
ENSAPLP00000032868
DEP domain-containing protein.
 
  
 
 0.940
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.495
OGFOD3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.495
SERAC1
Serine active site containing 1.
      
 0.493
RAPGEF5
Rap guanine nucleotide exchange factor 5.
  
 
 
0.487
PLCE1
Phosphoinositide phospholipase C.
   
  
 0.478
RRAD
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
    
 0.460
DIRAS3
Uncharacterized protein.
    
 0.441
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.