STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARPBPPARP1 binding protein. (576 aa)    
Predicted Functional Partners:
C1orf112
Chromosome 1 open reading frame 112.
   
  
 0.783
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.780
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.753
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.667
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.667
MTG2
Mitochondrial ribosome associated GTPase 2.
   
  
 0.662
NUP37
Nucleoporin 37.
   
 0.656
WDR25
WD repeat domain 25.
   
 0.648
CDC40
Cell division cycle 40.
   
 0.648
CCPG1
Cell cycle progression 1.
    
 0.645
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.