STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUM2Pumilio RNA binding family member 2. (1062 aa)    
Predicted Functional Partners:
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
   
 
 0.812
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
 
 0.751
MRPS25
Mitochondrial ribosomal protein S25.
    
 
 0.727
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
 
 0.722
CLINT1
Clathrin interactor 1.
   
 
 0.711
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.705
MRPL19
Mitochondrial ribosomal protein L19.
    
 
 0.704
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 
 0.703
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.703
YARS1
Tyrosine--tRNA ligase.
    
 
 0.697
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.