STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (343 aa)    
Predicted Functional Partners:
CHEK2
Checkpoint kinase 2.
      
 0.837
SLC35B2
Solute carrier family 35 member B2.
    
   0.740
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.717
MEGF11
Multiple EGF like domains 11.
      
 0.665
SLC16A4
Solute carrier family 16 member 4.
      
 0.641
HSP90AA1
Uncharacterized protein.
    
   0.618
ENSAPLP00000021501
HATPase_c domain-containing protein.
    
   0.618
ENSAPLP00000025272
Uncharacterized protein.
    
   0.618
HYI
Hydroxypyruvate isomerase (putative).
      
 0.595
MOSPD1
Motile sperm domain containing 1.
      
 0.588
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.