STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (218 aa)    
Predicted Functional Partners:
LTV1
Uncharacterized protein.
   
    0.745
BYSL
Bystin like.
   
  
 0.690
DDX52
Uncharacterized protein.
   
  
 0.638
ADGRA3
Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family.
      
 0.611
ENSAPLP00000023973
Uncharacterized protein.
      
 0.611
UTP23
UTP23 small subunit processome component.
   
    0.601
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.599
FAM13A
Family with sequence similarity 13 member A.
      
 0.592
FAM13A-2
Rho-GAP domain-containing protein.
      
 0.592
RPF2
Ribosome production factor 2 homolog.
   
   0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.