STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (218 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
  0.917
NOL6
Nucleolar protein 6.
   
 0.913
HEATR1
HEAT repeat containing 1.
   
  0.899
UTP23
UTP23 small subunit processome component.
   
  
 0.898
U3ISD0_ANAPP
Uncharacterized protein.
   
  0.851
UTP6
UTP6 small subunit processome component.
   
  0.813
LTV1
Uncharacterized protein.
   
  
 0.811
NOL10
Nucleolar protein 10.
   
 
  0.782
NOC4L
Nucleolar complex associated 4 homolog.
   
  0.743
NOP14
NOP14 nucleolar protein.
   
 
 0.743
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.