STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UFSP2UFM1 specific peptidase 2. (529 aa)    
Predicted Functional Partners:
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
    
 
 0.963
ODR4
Odr-4 GPCR localization factor homolog.
   
 
 0.881
UBA5
Ubiquitin like modifier activating enzyme 5.
  
  
 0.774
UFL1
UFM1 specific ligase 1.
   
  
 0.707
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
  
 0.684
ENSAPLP00000016691
Uncharacterized protein.
    
 
 0.651
SGSM3
Small G protein signaling modulator 3.
      
 0.641
U3I5A4_ANAPP
Uncharacterized protein.
      
 0.639
NUBPL
Nucleotide binding protein like.
      
 0.547
OTUD3
OTU deubiquitinase 3.
      
 0.544
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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