STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3ISZ0_ANAPPUncharacterized protein; Belongs to the DEAD box helicase family. (403 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 0.925
DDX42
Uncharacterized protein.
 
      0.900
SF3B3
Splicing factor 3b subunit 3.
   
 0.877
SF3A2
Splicing factor 3a subunit 2.
    
 0.876
ZMAT5
Zinc finger matrin-type 5.
    
 0.847
PHF5A
PHD finger protein 5A.
    
 0.792
SF3B4
Splicing factor 3b subunit 4.
    
 0.748
DHX15
DEAH-box helicase 15.
   
 0.703
SF3A1
Splicing factor 3a subunit 1.
   
 0.699
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.691
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.