STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD2SET and MYND domain containing 2. (547 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.673
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.673
PRDM6
PR/SET domain 6.
    
 0.664
ENSAPLP00000028245
Uncharacterized protein.
    
 0.644
ASH1L
ASH1 like histone lysine methyltransferase.
     
 0.628
METTL21A
Methyltransferase like 21A.
   
  
 0.611
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.597
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.590
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.576
KDM4C
Lysine demethylase 4C.
     
 0.574
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.