STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTM1Osteoclastogenesis associated transmembrane protein 1. (301 aa)    
Predicted Functional Partners:
CLCN7
Chloride channel protein.
    
 0.999
CLCN6
CBS domain-containing protein.
    
 0.922
ENSAPLP00000017997
Uncharacterized protein.
    
 0.922
TRABD
TraB domain containing.
      
 0.871
U3IIG3_ANAPP
GOLD domain-containing protein.
   
  
 0.864
SEC63
SEC63 homolog, protein translocation regulator.
 
  
 
 0.765
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
   
  
 0.761
CLCN5
Chloride channel protein.
    
 0.698
QPCT
Glutaminyl-peptide cyclotransferase.
   
  
 0.688
GCDH
Glutaryl-CoA dehydrogenase.
   
  
 0.676
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.