STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (619 aa)    
Predicted Functional Partners:
HAUS2
HAUS augmin like complex subunit 2.
   
  
 0.769
RELL1
RELT like 1.
      
 0.694
DENND5B
DENN domain containing 5B.
      
 0.659
PHKB
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
   
  
 0.642
MRPS5
Mitochondrial ribosomal protein S5.
    
 
 0.622
MRPL19
Mitochondrial ribosomal protein L19.
      
 0.612
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.596
GPR22
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.593
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
      
 0.574
POMP
Proteasome maturation protein.
      
 0.574
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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