STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC149Coiled-coil domain containing 149. (574 aa)    
Predicted Functional Partners:
ZBTB49
Zinc finger and BTB domain containing 49.
      
 0.779
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
      
 0.716
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.715
PACRGL
Parkin coregulated like.
      
 0.711
CCDC125
Coiled-coil domain containing 125.
      
 0.694
DHX15
DEAH-box helicase 15.
      
 0.682
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.682
LGI2
Leucine rich repeat LGI family member 2.
      
 0.677
U3HYG5_ANAPP
DUF4201 domain-containing protein.
      
 0.666
SLC36A4
Solute carrier family 36 member 4.
      
 0.665
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.