STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP1SUMO specific peptidase 1. (312 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin like modifier 1.
   
 0.951
SUMO2
Small ubiquitin-related modifier.
   
 0.940
ENSAPLP00000029099
Ubiquitin-like domain-containing protein.
   
 0.906
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.827
SENP7
SUMO specific peptidase 7.
   
 0.780
SENP6
SUMO specific peptidase 6.
   
0.777
NUP133
Nucleoporin 133.
   
 
 0.763
PIAS4
Protein inhibitor of activated STAT 4.
   
 
 0.744
SLC25A15
Solute carrier family 25 member 15; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.741
PIAS2
Protein inhibitor of activated STAT 2.
   
 
 0.734
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.