STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALR3Calreticulin. (389 aa)    
Predicted Functional Partners:
PDIA3
Protein disulfide-isomerase.
   
 0.989
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.977
TAP2
Uncharacterized protein.
   
 0.961
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
   
 0.946
ENSAPLP00000026233
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
 0.940
U3J601_ANAPP
Ig-like domain-containing protein; Belongs to the MHC class I family.
   
 
  0.917
TAPBPL
TAP binding protein like.
     
 0.913
LRP1
Uncharacterized protein.
    
 0.913
PDIA4
Protein disulfide-isomerase.
   
 0.909
C1QB
Complement C1q B chain.
    
  0.903
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.