STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain containing 39. (1002 aa)    
Predicted Functional Partners:
U3I2X0_ANAPP
Uncharacterized protein.
    
 
 0.778
LRRC6
Leucine rich repeat containing 6.
   
 0.760
DNAAF1
Dynein assembly factor 1, axonemal.
    
 
 0.746
ARMC4
Armadillo repeat containing 4.
   
 
 0.732
RSPH4A
Radial spoke head 6 homolog A.
   
 
 0.688
CCDC65
Coiled-coil domain containing 65.
   
 
 0.684
CFAP43
Cilia and flagella associated protein 43.
      
 0.666
TSNAXIP1
Uncharacterized protein.
   
 
 0.660
CFAP300
Cilia and flagella associated protein 300.
    
 
 0.644
SPAG1
Sperm associated antigen 1.
    
 
 0.643
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.