STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0391PRORP domain-containing protein. (596 aa)    
Predicted Functional Partners:
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.966
HARBI1
Harbinger transposase derived 1.
      
 0.819
SHPK
FGGY_N domain-containing protein.
      
 0.749
PIGZ
Mannosyltransferase.
      
 0.748
POP5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.676
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.625
GALNT1
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.611
DOCK3
Dedicator of cytokinesis 3; Belongs to the DOCK family.
      
 0.602
ENSAPLP00000028196
Gp_dh_C domain-containing protein.
  
  
 0.548
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.538
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.