STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN3Synapsin III. (582 aa)    
Predicted Functional Partners:
RIMS2
C2 domain-containing protein.
     
 0.931
ENSAPLP00000029757
Uncharacterized protein.
     
 0.931
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.900
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.810
SYT1
Synaptotagmin 1.
   
 0.782
ENSAPLP00000017041
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.737
SYNPR
Synaptoporin.
   
 
 0.737
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.737
SLC17A6
Solute carrier family 17 member 6.
   
 0.661
MAP2
Microtubule-associated protein.
   
 
 0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.