STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1008 aa)    
Predicted Functional Partners:
C19orf47
Chromosome 19 open reading frame 47.
   
    0.959
NUDT12
Nudix hydrolase 12.
   
 0.747
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.686
TRMT61B
tRNA methyltransferase 61B.
      
 0.669
FAAP24
FA core complex associated protein 24.
    
 0.666
WBP4
WW domain binding protein 4.
      
 0.635
APLP2
Amyloid beta precursor like protein 2.
     
 0.595
NUP98
Nucleoporin 98.
    
 0.573
PPP1R7
LRRcap domain-containing protein.
    
 0.571
MRPS31
Mitochondrial ribosomal protein S31.
      
 0.571
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.