STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD17ANK_REP_REGION domain-containing protein. (2097 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.661
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
 0.577
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.547
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.539
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.527
SMTNL2
Smoothelin like 2.
    
 
 0.521
RASL10B
RAS like family 10 member B.
    
 0.519
SCPEP1
Carboxypeptidase; Belongs to the peptidase S10 family.
    
 0.515
UHMK1
U2AF homology motif kinase 1.
    
 0.502
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 0.496
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.