STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY1RUN and FYVE domain containing 1. (694 aa)    
Predicted Functional Partners:
RAB4A
Uncharacterized protein.
    
 0.955
PRAG1
PEAK1 related, kinase-activating pseudokinase 1.
      
 0.704
RAB14
RAB14, member RAS oncogene family.
    
 0.649
BMX
Tyrosine-protein kinase.
    
  0.638
FAM13B
Family with sequence similarity 13 member B.
      
 0.612
RAB33A
RAB33A, member RAS oncogene family.
      
 0.611
U3IV88_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.611
U3IVP5_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.611
NME5
NME/NM23 family member 5; Belongs to the NDK family.
      
 0.611
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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