GAR1 protein (Anas platyrhynchos) - STRING interaction network

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GAR1

H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (215 aa)

Predicted Functional Partners:

DKC1

0.999

NOP10

0.999

NOP58

0.985

TERT

0.966

SHQ1

0.947

TRUB1

0.945

NAF1

0.942

SNU13

0.904

RRP12

0.904

RPP38

0.856

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DKC1	GAR1	ENSAPLP00000020817	ENSAPLP00000010653	DKCLD domain-containing protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
DKC1	NAF1	ENSAPLP00000020817	ENSAPLP00000002676	DKCLD domain-containing protein.	Nuclear assembly factor 1 ribonucleoprotein.	0.988
DKC1	NOP10	ENSAPLP00000020817	ENSAPLP00000029846	DKCLD domain-containing protein.	NOP10 ribonucleoprotein.	0.999
DKC1	NOP58	ENSAPLP00000020817	ENSAPLP00000008230	DKCLD domain-containing protein.	NOP58 ribonucleoprotein.	0.997
DKC1	RPP38	ENSAPLP00000020817	ENSAPLP00000001477	DKCLD domain-containing protein.	Ribonuclease P/MRP subunit p38.	0.828
DKC1	RRP12	ENSAPLP00000020817	ENSAPLP00000014306	DKCLD domain-containing protein.	Ribosomal RNA processing 12 homolog.	0.882
DKC1	SHQ1	ENSAPLP00000020817	ENSAPLP00000032255	DKCLD domain-containing protein.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.998
DKC1	SNU13	ENSAPLP00000020817	ENSAPLP00000000434	DKCLD domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.938
DKC1	TERT	ENSAPLP00000020817	ENSAPLP00000017788	DKCLD domain-containing protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.998
DKC1	TRUB1	ENSAPLP00000020817	ENSAPLP00000018991	DKCLD domain-containing protein.	TruB pseudouridine synthase family member 1.	0.501
GAR1	DKC1	ENSAPLP00000010653	ENSAPLP00000020817	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	DKCLD domain-containing protein.	0.999
GAR1	NAF1	ENSAPLP00000010653	ENSAPLP00000002676	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nuclear assembly factor 1 ribonucleoprotein.	0.942
GAR1	NOP10	ENSAPLP00000010653	ENSAPLP00000029846	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP10 ribonucleoprotein.	0.999
GAR1	NOP58	ENSAPLP00000010653	ENSAPLP00000008230	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP58 ribonucleoprotein.	0.985
GAR1	RPP38	ENSAPLP00000010653	ENSAPLP00000001477	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonuclease P/MRP subunit p38.	0.856
GAR1	RRP12	ENSAPLP00000010653	ENSAPLP00000014306	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribosomal RNA processing 12 homolog.	0.904
GAR1	SHQ1	ENSAPLP00000010653	ENSAPLP00000032255	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.947
GAR1	SNU13	ENSAPLP00000010653	ENSAPLP00000000434	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.904
GAR1	TERT	ENSAPLP00000010653	ENSAPLP00000017788	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.966
GAR1	TRUB1	ENSAPLP00000010653	ENSAPLP00000018991	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine synthase family member 1.	0.945

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