STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX3Paired box 3. (484 aa)    
Predicted Functional Partners:
MYF5
Myogenic factor.
   
 
 0.939
MYOD1
Myogenic factor.
   
 
 0.907
SOX10
SRY-box transcription factor 10.
   
 
 0.907
NCOA1
Nuclear receptor coactivator.
     
 0.906
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.782
MYF6
Myogenic factor 6.
   
 
 0.771
ZIC1
Zic family member 1.
   
 0.771
SOX9
SRY-box transcription factor 9.
   
 
 0.767
FOXE1
Forkhead box E1.
    
 0.695
TIMM9
zf-Tim10_DDP domain-containing protein.
   
 
 0.686
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.