STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEIL2Nei like DNA glycosylase 2. (319 aa)    
Predicted Functional Partners:
NEIL1
Nei like DNA glycosylase 1.
     
 0.948
SUOX
Sulfite oxidase.
      
 0.820
ENSAPLP00000028415
XRCC1_N domain-containing protein.
     
 0.743
OGG1
8-oxoguanine DNA glycosylase.
     
 0.699
NTHL1
Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.
      
 0.678
POLL
DNA polymerase lambda; Belongs to the DNA polymerase type-X family.
     
 0.662
TDP1
Tyrosyl-DNA phosphodiesterase 1.
      
 0.636
ENSAPLP00000017030
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.611
PWWP2B
PWWP domain containing 2B.
      
 0.611
NUDT15
Nudix hydrolase 15.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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