STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG3L2AFG3 like matrix AAA peptidase subunit 2. (805 aa)    
Predicted Functional Partners:
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
   0.917
PHB
Prohibitin.
   
 0.904
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
0.876
PHB2
Prohibitin.
   
 0.860
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.836
PMPCB
Peptidase, mitochondrial processing beta subunit; Belongs to the peptidase M16 family.
  
 0.819
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
  
 0.801
MRPL2
Mitochondrial ribosomal protein L2.
   
 
 0.796
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.772
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.748
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.