STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG1LAFG1 like ATPase. (464 aa)    
Predicted Functional Partners:
LRTM2
Leucine rich repeats and transmembrane domains 2.
      
 0.634
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.634
APBB2
Amyloid beta precursor protein binding family B member 2.
    
 
 0.614
MKLN1
Muskelin 1.
      
 0.611
TRAPPC9
Trafficking protein particle complex 9.
      
 0.609
U3IH39_ANAPP
Uncharacterized protein.
      
 0.604
ENSAPLP00000019486
DUF4195 domain-containing protein.
      
 0.604
ZNF280D
Uncharacterized protein.
      
 0.604
U3IGU3_ANAPP
B30.2/SPRY domain-containing protein.
      
 0.594
ENSAPLP00000029980
Uncharacterized protein.
      
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.