STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEZF1Vascular endothelial zinc finger 1. (542 aa)    
Predicted Functional Partners:
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.647
SRBD1
S1 RNA binding domain 1.
    
 
 0.647
ZBTB10
Zinc finger and BTB domain containing 10.
      
 0.632
NAIF1
Nuclear apoptosis inducing factor 1.
     
 0.562
TBC1D16
TBC1 domain family member 16.
      
 0.555
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 0.532
TERF2
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 0.528
ZNF644
Zinc finger protein 644.
  
 
 
 0.478
RUNX3
Runt-related transcription factor.
    
 0.409
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.