STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMMECR1AMMECR1 domain-containing protein. (185 aa)    
Predicted Functional Partners:
PRPF38A
Pre-mRNA processing factor 38A.
      
 0.608
EDC3
Enhancer of mRNA decapping 3.
   
  
 0.556
FCF1
FCF1 rRNA-processing protein.
      
 0.519
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.519
SLC4A1AP
Solute carrier family 4 member 1 adaptor protein.
      
 0.518
MYO9B
Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.516
NOL7
Nucleolar protein 7.
      
 0.497
RBM45
RNA binding motif protein 45.
   
  
 0.488
ZNF384
Zinc finger protein 384.
   
  
 0.488
SF3A3
Splicing factor 3a subunit 3.
      
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.