STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX4DEAD-box helicase 4; Belongs to the DEAD box helicase family. (586 aa)    
Predicted Functional Partners:
DAZL
RRM domain-containing protein.
   
 0.881
PRPF6
Pre-mRNA processing factor 6.
   
 0.779
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.768
U3I160_ANAPP
Cor1 domain-containing protein.
   
 
 0.764
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.726
DDX42
Uncharacterized protein.
 
   
 0.719
MOV10L1
Mov10 like RISC complex RNA helicase 1.
    
 0.717
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.700
PRDM14
PR/SET domain 14.
   
 
 0.699
CDC5L
Cell division cycle 5 like.
    
 0.696
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.