STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAXBP1PAX3 and PAX7 binding protein 1. (966 aa)    
Predicted Functional Partners:
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 0.721
EVA1C
Uncharacterized protein.
      
 0.684
DHX15
DEAH-box helicase 15.
    
 0.682
FERD3L
Fer3 like bHLH transcription factor.
   
  
 0.655
HUNK
Hormonally up-regulated Neu-associated kinase.
      
 0.624
URB1
URB1 ribosome biogenesis homolog.
   
  
 0.614
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.599
CDC40
Cell division cycle 40.
     
 0.591
DHX32
DEAH-box helicase 32 (putative).
    
 0.556
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.556
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.