STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBApolipoprotein B. (4563 aa)    
Predicted Functional Partners:
U3J6E8_ANAPP
Apovitellenin-1; Protein component of the very low density lipoprotein (VLDL) of egg-laying females. Potent lipoprotein lipase inhibitor, preventing the loss of triglycerides from VLDL on their way from the liver to the growing oocytes.
   
 
 0.971
MTTP
Microsomal triglyceride transfer protein.
   
 0.969
CETP
Cholesteryl ester transfer protein.
   
 
 0.922
ENSAPLP00000020757
Uncharacterized protein.
   
 
 0.907
ENSAPLP00000024521
EH domain-containing protein.
   
 
 0.907
ENSAPLP00000028453
annotation not available
   
 
 0.907
ENSAPLP00000028515
Uncharacterized protein.
   
 
 0.907
ITSN2
Uncharacterized protein.
   
 
 0.907
P4HB
Protein disulfide-isomerase.
   
 0.900
LIPC
Lipase C, hepatic type.
   
 0.883
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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