STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT4Synaptotagmin 4. (425 aa)    
Predicted Functional Partners:
RPH3AL
Uncharacterized protein.
 
 
 
 0.739
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.722
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.700
SYT2
Synaptotagmin 2.
   
0.686
SYT1
Synaptotagmin 1.
   
0.686
VAMP3
Vesicle associated membrane protein 3.
    
 0.677
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.627
VAMP4
Vesicle associated membrane protein 4.
    
 0.600
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
 0.581
U3I931_ANAPP
V-SNARE coiled-coil homology domain-containing protein.
   
 0.573
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.