STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 1. (626 aa)    
Predicted Functional Partners:
MANSC4
MANSC domain containing 4.
    
 
 0.814
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
  
0.797
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.791
DDX28
DEAD-box helicase 28.
    
 0.781
TTC38
Tetratricopeptide repeat domain 38.
      
 0.747
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.692
RNASEL
Uncharacterized protein.
    
 0.690
HGFAC
HGF activator.
    
 0.689
HABP2
Hyaluronan binding protein 2.
    
 0.689
NTNG1
Netrin G1.
    
 0.683
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.