STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP290Centrosomal protein 290. (2332 aa)    
Predicted Functional Partners:
IQCB1
IQ motif containing B1.
    
 
 0.852
RPGRIP1L
RPGRIP1 like.
   
 
 0.845
TMEM67
Transmembrane protein 67.
   
  
 0.828
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.824
TMEM216
Transmembrane protein 216.
      
 0.791
NPHP1
Nephrocystin 1.
   
 0.785
PCM1
Pericentriolar material 1.
   
 
 0.784
TMEM237
Transmembrane protein 237.
   
 
 0.760
CEP120
Centrosomal protein 120.
   
 0.742
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.718
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.