STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHS2NPHS2 stomatin family member, podocin. (370 aa)    
Predicted Functional Partners:
CD2AP
CD2 associated protein.
   
 
 0.878
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
     
 0.690
TRPC6
Transient receptor potential cation channel subfamily C member 6.
    
 
 0.658
WT1
WT1 transcription factor.
    
 0.622
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.620
BCS1L
BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone; Belongs to the AAA ATPase family.
   
 0.620
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
   
 0.620
YME1L1
YME1 like 1 ATPase.
   
 0.620
ACTN4
Actinin alpha 4.
    
 
 0.613
SYNPO
Synaptopodin.
     
 0.596
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.