STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD40LGCD40 ligand; Belongs to the tumor necrosis factor family. (324 aa)    
Predicted Functional Partners:
CD40
TNFR-Cys domain-containing protein.
   
 0.999
CD4
Ig-like domain-containing protein.
   
 0.933
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
   
 
 0.879
ENSAPLP00000020285
IGv domain-containing protein.
  
  
 0.849
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.807
IL4
Uncharacterized protein.
      
 0.777
CD86
CD86 molecule.
   
  
 0.776
ENSAPLP00000023833
BaffR-Tall_bind domain-containing protein.
     
 0.753
CTLA4
Cytotoxic T-lymphocyte associated protein 4.
   
 
 0.737
TNFRSF11B
TNF receptor superfamily member 11b.
   
 0.732
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.